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ydiR [2019-07-23 11:42:48]
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ydiR [2019-07-23 11:42:48]

component of the BsuM DNA restriction system
locus
BSU_06090
pI
4.39
mw
35.16 kDa
protein length
313 aa Sequence Blast
gene length
942 bp Sequence Blast
function
BsuM DNA restriction
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.4|DNA restriction/ modification]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.5|Prophage 3]

    • Gene

    Coordinates
    659,623 660,564

    Expression and Regulation

    Operons

    genes
    [gene|4BD4CFB10700907DF1BBF3C9CFACAF573588E85F|ydiR]-[gene|A8C606348C8C6FC3BB9786C06C9BFE9D3519A041|ydiS]-[gene|D36B91B3C8EAFEB80A7395C62A50A5F80B8CC5C5|ydjA]
    description
    [Pubmed|11751814]
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    Biological materials

    Mutant

  • MGNA-C207 (ydiR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2205 NBRP B. subtilis, Japan]
  • BKE06090 ([gene|4BD4CFB10700907DF1BBF3C9CFACAF573588E85F|ydiR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE06090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATTTTACCCCCATAA, downstream forward: _UP4_TAAGCGATAAACTTTAAATA
  • BKK06090 ([gene|4BD4CFB10700907DF1BBF3C9CFACAF573588E85F|ydiR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK06090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATTTTACCCCCATAA, downstream forward: _UP4_TAAGCGATAAACTTTAAATA

    • References

  • 11751814,22092861